Dr. Zhaohua Peng
Overview
Education
- Ohio State University, The, Doctor of Philosophy (PHD), Plant Biology
- China Agricultural University, Master of Science (MS), Biophysics
- China Agricultural University, Bachelor of Science (BS), Biophysics
Research Interests
Plant molecular biology
Plant development
Proteomics
Website
Publications
Year | Publications |
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2021 | Wang, Y., Wang, H., Peng, Z. 2021. Rice Diseases Detection and Classification Using Attention Based Neural Network and Bayesian Optimization. Expert Systems with Applications |
2021 | Zhong, H., Liu, S., Zhao, F., Zhao, Y., Zhou, J., Tang, F., Peng, Z., Li, Y., Xu, S., Wang, C., Yang, G., Li, Z. 2021. Dissecting Tumor Antigens and Immune Subtypes of Gliomato Develop mRNA Vaccine. Frontiers inmmunology 12:1-. |
2021 | Zhong, H., Liu, S., Sun, T., Kong, W., Deng, X., Peng, Z., Li, Y. 2021. Multi-locus genome-wide association studies for five yield-related traits in rice. BMC Plant Biology 21(364). |
2021 | Zhong, H., Liu, S., Zhao, G., Zhang, C., Peng, Z., Wang, Z., Yang, J., LI, Y. 2021. Genetic Diversity Relationship Between Grain Quality and Appearance in Rice. Frontiers in Plant Science 12(708996):1-13. |
2021 | Liu, S., Zhong, H., Wang, Q., Liu, C., Li, T., Peng, Z., LI, Y., Zhang, H., Liao, J., Huang, Y., Wang, Z. 2021. Global Analysis of UDP Glucose Pyrophosphorylase (UDPGP) Gene Family in Plants: Conserved Evolution Involved in Cell Death . Frontiers in Plant Science 12(681719):1-18. |
2021 | Zhong, H., Liu, S., Meng, x., Sun, T., Deng, Y., Kong, W., Peng, Z., Li, Y. 2021. Uncovering the genetic mechanisms regulating panicle architecture in rice with GPWAS and GWAS. BMC Genomics 22(86):1-13. |
2020 | Liao, S., Hasan, M. S., Yang, Z., Stevens, A. W., Brett, J. A., Peng, Z. 2020. Feeding arsenic-containing rice bran to growing pigs: Growth performance, arsenic tissue distribution, and arsenic excretion. Int. J. Environ. Res. Public Health 17(22):8530. |
2020 | Liu, S., Zhong, H., Meng, X., Sun, T., Li, Y., Pinson, S., Chang, K., Peng, Z. 2020. Genome-wide association studies of ionomic and agronomic traits in USDA minicore collection of rice and comparative analyses of different mapping methods . BMC Plant Biology |
2019 | Meng, X., Mujahid , H., Zhang, Y., Peng, X., Redona, E., wang, c., Peng, Z. 2019. Comprehensive Analysis of the Lysine Succinylome and Protein Co-modifications in Developing Rice Seeds. Mol Cell Proteomics. 18(12):2359-2372. |
2018 | Meng, X., Lv, Y., Mujahid, H., Edelmann, M. J., Zhao, H., Peng, X., Peng, Z. 2018. Proteome-wide lysine acetylation identification in developing rice (Oryza sativa) seeds and protein co-modification by acetylation, succinylation, ubiquitination, and phosphorylation. Biochimica et biophysica acta. Proteins and proteomics 1866(3):451-463. |
2018 | Mujahid, H., Meng, X., Xing, S., Peng, X., Wang, C., Peng, Z. 2018. Malonylome analysis in developing rice (Oryza sativa) seeds suggesting that protein lysine malonylation is well-conserved and overlaps with acetylation and succinylation substantially. Journal of proteomics 170:88-98. |
2017 | Meng, X., Xing, S., Perez, L. M., Peng, X., Zhao, Q., Redona, E., Wang, C., Peng, Z. 2017. Proteome-wide Analysis of Lysine 2-hydroxyisobutyrylation in Developing Rice (Oryza sativa) Seeds. Scientific reports 7(1):17486. |
2017 | Meng, X., Lv, Y., Mujahid, H., Edelmann, M. J., Zhao, H., Peng, X., Peng, Z. 2017. Proteome-wide lysine acetylation identification in developing Rice (Oryza sativa) seeds and protein co-modification by acetylation, Succinylation, ubiquitination, and phosphorylation. Biochimica et biophysica acta |
2016 | Xing, S., Meng, X., Zhou, L., Mujahid, H., Zhao, C., Zhang, Y., Wang, C., Peng, Z. 2016. Proteome Profile of Starch Granules Purified from Rice (Oryza sativa) Endosperm. PloS one 11(12):e0168467. |
2016 | Lv, Y., Liang, Z., Ge, M., Qi, W., Zhang, T., Lin, F., Peng, Z., Zhao, H. 2016. Genome-wide identification and functional prediction of nitrogen-responsive intergenic and intronic long non-coding RNAs in maize (Zea mays L.). BMC genomics 17:350. |
2016 | Peng, Z., Liang, Z., Qi, W., Zhang, T., lin, F., Peng, Z., Zhao, H. 2016. Genome-wide identification and functional prediction of nitrogen-responsive intergenic and intronic long non-coding RNAs in maize (Zea mays L.). . BMC Genomics 17:350. |
2016 | Mujahid, H., Pendarvis, K., Reddy, J. S., Nallamilli, B. R., Reddy, K. R., Nanduri, B. B., Peng, Z. 2016. Comparative Proteomic Analysis of Cotton Fiber Development and Protein Extraction Method Comparison in Late Stage Fibers. Proteomes 4(1). |
2016 | Mujahid, H., Pendarvis, K., Reddy, J. S., Nallamilli, B. R., Reddy, K. R., Naduri, B., Peng, Z. 2016. Comparative proteomic analysis of cotton fiber development and protein Extraction method comparison in late stage fibers. Protemes 4(7):1-18. Download |
2014 | Nallamilli, B. R., Edelmann, M. J., Zhong, X., Tan, F., Mujahid, H., Zhang, J., Nanduri, B. B., Peng, Z. 2014. Global analysis of lysine acetylation suggests the involvement of protein acetylation in diverse biological processes in rice (Oryza sativa). PloS One 9(2):e89283. |
2013 | Mujahid, H., Tan, F., Zhang, J., Nallamilli, B. R., Pendarvis, K., Peng, Z. 2013. Nuclear proteome response to cell wall removal in rice (Oryza sativa). Proteome science 11(1):26. |
2013 | Nallamilli, B. R., Zhang, J., Mujahid, H., Malone, B. M., Bridges, S. M., Peng, Z. 2013. Polycomb group gene OsFIE2 regulates rice (Oryza sativa) seed development and grain filling via a mechanism distinct from Arabidopsis. PLoS Genetics 9(3):e1003322. |
2011 | Sharma, R., Tan, F., Jung, K. H., Sharma, M. K., Peng, Z., Ronald, P. C. 2011. Transcriptional dynamics during cell wall removal and regeneration reveals key genes involved in cell wall development in rice. Plant molecular biology 77(4-5):391-406. |
2011 | La , H., Ding, B., Mishra, G. P., Zhou, B., Yang, H., Bellizzi Mdel, R., Chen, S., Meyers, B. C., Peng, Z., Zhu, J. K., Wang, G. 2011. A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice. Proceedings of the National Academy of Sciences of the United States of America 108(37):15498-503. |
2011 | Tan, F., Zhang, K., Mujahid, H., Verma, D. P., Peng, Z. 2011. Differential histone modification and protein expression associated with cell wall removal and regeneration in rice (Oryza sativa). Journal of proteome research 10(2):551-63. |
2011 | Malone, B. M., Tan, F., Bridges, S. M., Peng, Z. 2011. Comparison of four ChIP-Seq analytical algorithms using rice endosperm H3K27 trimethylation profiling data. PloS one 6(9):e25260. |
2010 | Zhang, J., Nallamilli, B. R., Mujahid, H., Peng, Z. 2010. OsMADS6 plays an essential role in endosperm nutrient accumulation and is subject to epigenetic regulation in rice (Oryza sativa). The Plant Journal 64(4):604-17. |
2009 | Kakani, A., Li , G., Peng, Z. 2009. Role of AUX1 in the control of organ identity during in vitro organogenesis and in mediating tissue specific auxin and cytokinin interaction in Arabidopsis. Planta 229(3):645-57. |
2008 | Chitteti, B. R., Tan, F., Mujahid, H., Magee, B. G., Bridges, S. M., Peng, Z. 2008. Comparative analysis of proteome differential regulation during cell dedifferentiation in Arabidopsis. Proteomics 8(20):4303-16. |
2008 | Li , G., Nallamilli, B. R., Tan, F., Peng, Z. 2008. Removal of high-abundance proteins for nuclear subproteome studies in rice (Oryza sativa) endosperm. Electrophoresis 29(3):604-17. |
2007 | Tan, F., Li , G., Chitteti, B. R., Peng, Z. 2007. Proteome and phosphoproteome analysis of chromatin associated proteins in rice (Oryza sativa). Proteomics 7(24):4511-27. |
2007 | Chitteti, B. R., Peng, Z. 2007. Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza sativa) roots. Journal of proteome research 6(5):1718-27. |
2007 | Chitteti, B. R., Peng, Z. 2007. Proteome and phosphoproteome dynamic change during cell dedifferentiation in Arabidopsis. Proteomics 7(9):1473-500. |
2003 | Serino, G., Su, H., Peng, Z., Tsuge, T., Wei, N., Gu, H., Deng, X. W. 2003. Characterization of the last subunit of the Arabidopsis COP9 signalosome: implications for the overall structure and origin of the complex. The Plant cell 15(3):719-31. |
2001 | Peng, Z., Serino, G., Deng, X. W. 2001. A role of Arabidopsis COP9 signalosome in multifaceted developmental processes revealed by the characterization of its subunit 3. Development (Cambridge, England) 128(21):4277-88. |
2001 | Peng, Z., Serino, G., Deng, X. W. 2001. Molecular characterization of subunit 6 of the COP9 signalosome and its role in multifaceted developmental processes in Arabidopsis. The Plant cell 13(11):2393-407. |
2001 | Peng, Z., Staub, J. M., Serino, G., Kwok, S. F., Kurepa, J., Bruce, B. D., Vierstra, R. D., Wei, N., Deng, X. W. 2001. The cellular level of PR500, a protein complex related to the 19S regulatory particle of the proteasome, is regulated in response to stresses in plants. Molecular biology of the cell 12(2):383-92. |
1996 | Peng, Z., Lu, Q., Verma, D. P. 1996. Reciprocal regulation of delta 1-pyrroline-5-carboxylate synthetase and proline dehydrogenase genes controls proline levels during and after osmotic stress in plants. Molecular & general genetics : MGG 253(3):334-41. |
1995 | Peng, Z., Verma, D. P. 1995. A rice HAL2-like gene encodes a Ca(2+)-sensitive 3'(2'),5'-diphosphonucleoside 3'(2')-phosphohydrolase and complements yeast met22 and Escherichia coli cysQ mutations. The Journal of biological chemistry 270(49):29105-10. |
Extension Publications
Year | Publications |
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Graduate Students
- Shuai Liu
Awards & Honors
- Best graduate poster winner
BCH-EPP Research Poster Symposium - Fifth Place
Mississippi Academy of Sciences - travel award
NSF Plant Genome Editing Workshop - Exceptional poster presentation award
Nebraska Plant Breeding Symposium - Travel Award
Nebraska Plant Breeding Symposium - Mississippi New Venture Challenge Third Place Award
Innovate Mississippi
Society Memberships
- American association of advanced science
- The protein society